rs395446 chr22:20116778 T>C
- Sequence
ccattcccgtctcctttcctcccc[T/C]atcgcacctgcctcgtccccacct
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN MBD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 3.02 | n/a | 1.50 | n/a | No Hit | |||
| MBD4_HUMAN | 1.49 | -0.39 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Nerve_Tibial, Thyroid, Whole_Blood