rs396507 chr19:18043879 C>G

Sequence
caaatggctgtgggagggtgcatg[C/G]tgctgacacttgggaaaaacctct
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HUVEC-C (HUVEC, umbilical vein endothelial cells) 2.30 -0.95 3.4·10-41.00 1.67
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  homa-b,  ldl cholesterol change with statins,  obesity with early age of onset (age >2),  refractive error,  total cholesterol change with statins
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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