rs398377 chr4:2009246 T>G
- Sequence
ccgtaaaacatcatggcggcgccc[T/G]ctgctggctctcgggaagaccgca
- ASB in cell types
- spleen pancreas adrenal gland thyroid gland
- ASB for transcription factors
- CTCF_HUMAN CREB1_HUMAN STAT1_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.83 | -0.40 | 2.41 | -4.18 | Concordant | |||
| CREB1_HUMAN | 1.16 | -0.23 | 1.59 | n/a | No Hit | |||
| STAT1_HUMAN | 1.97 | -0.94 | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 2.31 | 0.14 | 1.50 | n/a | No Hit | |||
| UBP7_HUMAN | n/a | 3.27 | 2.00 | n/a | n/a |
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Motif analysis
