rs399799 chr19:3142235 A>C

Sequence
ggtatcctaaaacagatcactccc[A/C]ccatttctatccaggagctggggg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN SUH_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -4.83 3.10 1.005.0·10-5 2.00 n/a No Hit
SUH_HUMAN n/a 3.63 1.004.0·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Skin_Sun_Exposed_Lower_leg

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