rs400023 chr4:85335385 A>G

Sequence
cacatcctacatcatatggtacct[A/G]attgactagtcaacatttatacat
ASB in cell types
ZR-75-1 (invasive ductal carcinoma)
ASB for transcription factors
GATA3_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN -0.13 2.48 0.902.9·10-4 2.00 n/a No Hit
FOXA1_HUMAN 0.22 2.05 1.000.05 1.71 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  birth weight,  major depressive disorder,  waist hip ratio
GTEx eQTL Esophagus_Muscularis

Download