rs400222 chr22:22409509 T>C
- Sequence
tggacactagagggcacttgggga[T/C]cattcctgagaagactgaggttga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte LNCaP (prostate carcinoma) K562 (myelogenous leukemia)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 1.91 | -0.16 | 1.95 | |||
| foreskin keratinocyte | -2.72 | 1.92 | 2.50 | |||
| LNCaP (prostate carcinoma) | 1.90 | -2.00 | 1.17 | |||
| K562 (myelogenous leukemia) | 0.63 | 0.65 | 5.84 | |||
| KMS-11 (Plasma cell myeloma) | 2.10 | n/a | 2.00 |
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