rs401537 chr1:83164132 T>C

Sequence
tggtggttttgacaacattgcctc[T/C]gtacataattgaatgtcattcatt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) bipolar neuron
ASB for transcription factors
ESR1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.50 n/a 1.1·10-41.00 2.00 n/a No Hit
SMCA4_HUMAN 2.42 -2.26 0.021.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP asthma,  fasting blood glucose,  variant creutzfeldt-jakob disease
GTEx eQTL Esophagus_Mucosa,  Prostate,  Thyroid

Download