rs401763 chr6:27814750 T>C
- Sequence
accacgcccagacatggcaaaagg[T/C]ctattacctttacggtcaagaaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- SMAD1_HUMAN MEF2B_HUMAN STAG1_HUMAN ZBT40_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD1_HUMAN | 3.46 | n/a | 1.50 | n/a | n/a | |||
| MEF2B_HUMAN | 3.01 | -3.10 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 2.20 | -2.10 | 1.17 | n/a | n/a | |||
| ZBT40_HUMAN | 2.87 | -2.94 | 1.00 | n/a | No Hit | |||
| KLF5_HUMAN | 2.38 | n/a | 1.00 | n/a | No Hit |
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