rs401910 chr22:17996681 A>G
- Sequence
cccaggggatccgagctgaattct[A/G]aagactggaaccaaagatgacaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- SRF_HUMAN IKZF2_HUMAN FOXP1_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | 1.15 | -1.15 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.29 | -0.13 | 1.00 | n/a | n/a | |||
| FOXP1_HUMAN | 2.51 | -0.45 | 1.75 | n/a | No Hit | |||
| SPI1_HUMAN | 1.05 | -0.21 | 1.50 | n/a | No Hit |
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