rs403084 chr5:149440151 T>C

Sequence
accgctaatcccagggcaataata[T/C]ctccccctcacctttattagtggc
ASB in cell types
foreskin keratinocyte breast tumor
ASB for transcription factors
ESR1_HUMAN CTCF_HUMAN GRHL2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.47 2.87 1.006.4·10-3 1.67 n/a No Hit
CTCF_HUMAN 0.74 0.65 1.000.01 1.32 n/a No Hit
GRHL2_HUMAN -0.03 2.41 1.000.04 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  asthma,  transmission distortion

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