rs403871 chr15:47409274 G>A
- Sequence
gaggaaatgtgggagagagcccca[G/A]ggaacacattgtacccctctctct
- ASB in cell types
- LNCaP95 HASM2 (Human airway smooth muscle 2)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.60 | 0.13 | 1.81 | 1.58 | Weak Discordant | |||
| GCR_HUMAN | 2.16 | -0.95 | 1.00 | 0.28 | Weak Discordant |
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Motif analysis
