rs405178 chr20:5804500 T>G
- Sequence
gcaggctaattttgtttgttcagg[T/G]tttgccacatcctgtgatcgttca
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells)
- ASB for transcription factors
- CDK9_HUMAN MYB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -1.17 | 1.73 | 1.00 | n/a | n/a | |||
| MYB_HUMAN | -0.48 | 2.09 | 2.00 | n/a | No Hit |
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