rs406117 chr12:92405220 G>T
- Sequence
ttcacattgaaacagttgtgctag[G/T]cttcatcccaagaatgtgtgctgg
- ASB in cell types
- primary B-CLL cells
- ASB for transcription factors
- BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | n/a | 2.16 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, autism, ldl cholesterol, paternal transmission distortion, rheumatoid arthritis, transmission distortion
GTEx eQTL Cells_EBV-transformed_lymphocytes, Heart_Atrial_Appendage, Small_Intestine_Terminal_Ileum, Spleen