rs408376 chr11:131511952 T>C
- Sequence
gtgcagggcccggcccctattcta[T/C]ggtccagaatttccagccatagtg
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) MCF10AT1 (breast premetastatic epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 0.47 | 1.35 | n/a | No Hit |
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