rs408451 chr6:149463955 A>C

Sequence
gatcatgagttctattttagacac[A/C]tattgagctgttaacatttccact
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.15 0.27 7.7·10-31.00 1.64 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP asthma,  college completion,  parkinsons disease,  tardive dyskinesia,  years of education
GTEx eQTL Brain_Cortex,  Heart_Atrial_Appendage,  Skin_Not_Sun_Exposed_Suprapubic

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