rs40897 chr7:108526346 A>G
- Sequence
gcgcaaggcgggaagccgcgacag[A/G]cgtgtgtgcgtgcgtgcgtgcgtg
- ASB in cell types
- upper lobe of left lung fetal bone marrow-derived mononuclear cells MCF7 (Invasive ductal breast carcinoma) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- MAX_HUMAN KMT2A_HUMAN MEN1_HUMAN ARI1A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAX_HUMAN | -0.28 | 1.50 | 1.25 | n/a | No Hit | |||
| KMT2A_HUMAN | 3.10 | -5.17 | 1.50 | -1.05 | Weak Concordant | |||
| MEN1_HUMAN | 3.02 | n/a | 1.50 | n/a | n/a | |||
| ARI1A_HUMAN | -0.58 | 1.61 | 1.50 | n/a | No Hit | |||
| E2F6_HUMAN | -1.71 | 2.09 | 1.00 | n/a | No Hit |
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Motif analysis
