rs409211 chr15:85047411 C>T

Sequence
tggttattttggggggagcagtgg[C/T]aagtagttgtccggctgttaggag
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN ZEB2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN n/a 3.10 1.004.8·10-5 2.00 n/a No Hit
ZEB2_HUMAN -0.49 1.96 1.000.02 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Colon_Transverse,  Thyroid

Download