rs40968 chr16:79601225 G>T

Sequence
accaactctggtacccaggtgtct[G/T]ccggggaccttccttccctgagcc
ASB in cell types
22RV1 (prostate carcinoma) HEK293 (embryonic kidney) TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
ANDR_HUMAN SUZ12_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.43 -1.11 3.9·10-31.00 2.00 -2.30 Concordant
SUZ12_HUMAN 1.93 0.45 0.011.00 1.33 n/a n/a
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

No data available

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