rs409961 chr5:106748516 T>A

Sequence
aatcatcctgagatctaagaaaag[T/A]tggacttctctaaggagaaactgg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -0.52 2.17 1.007.7·10-3 1.75 -0.15 Weak Discordant
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Motif analysis

TF65_HUMAN Weak Discordant
TF65_HUMAN pic

Genetic associations

GRASP aortic valve calcium,  hdl cholesterol,  years of education

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