rs410806 chr5:34655539 A>C
- Sequence
taatggtggagtccatcgtaattg[A/C]aaggtcgggccttagtgggctggg
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- SP7_HUMAN ZBT26_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP7_HUMAN | n/a | 2.30 | 3.00 | 2.76 | Concordant | |||
| ZBT26_HUMAN | n/a | 2.87 | 3.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid