rs410809 chr5:127515944 G>C
- Sequence
aaacagtacttactttattttcct[G/C]ttcctaccctctctcctattataa
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.96 | -0.22 | 1.45 | -5.91 | Concordant | |||
| FOXA1_HUMAN | 0.64 | -0.07 | 1.72 | n/a | No Hit |
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Motif analysis
