rs410867 chr19:16316300 A>G
- Sequence
acatactgaaaaagggttgtgcaa[A/G]cttcagcagaaacaccccaattgc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TIF1A_HUMAN ATF3_HUMAN CEBPB_HUMAN ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1A_HUMAN | n/a | 2.27 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | n/a | 1.84 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.09 | 1.44 | 1.88 | 1.85 | Weak Concordant | |||
| ATF4_HUMAN | n/a | 2.44 | 2.00 | 0.43 | Weak Concordant | |||
| KDM1A_HUMAN | -0.27 | 1.52 | 2.00 | n/a | n/a |
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Motif analysis
