ADASTRA v6.1.0
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rs41105
chr5:77491867
G
>
C
Sequence
gccagaagccctaagttgtcacag[G/C]tcccaataggactgctgaccagct
ASB in cell types
primary B-CLL cells
tibial nerve
RPMI8226 (Plasma cell myeloma)
ASB for transcription factors
EP300_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN
2.24
-2.06
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellum
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Spinal_cord_cervical_c-1
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)