rs41300395 chr3:196082264 C>A
- Sequence
gccctatgcggagggcgctgcggg[C/A]gaggcgaaggccaagggaaaaggc
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) fetal bone marrow-derived mononuclear cells liver
- ASB for transcription factors
- CDK8_HUMAN ZBT25_HUMAN MEN1_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | -0.68 | 2.59 | 1.00 | n/a | n/a | |||
| ZBT25_HUMAN | -2.61 | 2.96 | 1.00 | n/a | n/a | |||
| MEN1_HUMAN | 1.55 | n/a | 2.00 | n/a | n/a | |||
| GABPA_HUMAN | 0.43 | 1.37 | 1.43 | n/a | No Hit | |||
| MED26_HUMAN | -0.23 | 2.02 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Colon_Transverse, Esophagus_Mucosa, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid