rs41315475 chr21:34512335 G>A
- Sequence
catgtggcatgaccaggctggggc[G/A]tcgggtcatcttgttctctgggtg
- ASB in cell types
- monocytes from periferal blood THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 1.84 | 0.35 | 3.00 | 1.15 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Lung, Spleen, Testis, Thyroid, Whole_Blood