rs413338 chr5:14026035 G>A

Sequence
gcagtttgacaggagtgaaagtgg[G/A]atgcccccccatagttgaccaggc
ASB in cell types
Detroit 562 (Pharyngeal squamous cell carcinoma) PC9 (lung adenocarcinoma)
ASB for transcription factors
TF65_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 0.00 1.53 1.008.4·10-3 1.00 1.45 Weak Concordant
BRD4_HUMAN -0.67 2.02 1.000.04 2.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

TF65_HUMAN Weak Concordant
TF65_HUMAN pic

Genetic associations

No data available

Download