rs41339545 chr1:67274967 G>A
- Sequence
agaaactaaatctcagtgcacaaa[G/A]aaaatgtatctgcaatgaattcat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.61 | -2.35 | 1.00 | n/a | n/a | |||
| NFAC3_HUMAN | 2.36 | -2.02 | 1.00 | -1.76 | Weak Concordant |
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Motif analysis
