rs41345949 chr17:17236986 C>T
- Sequence
cccgctctgggtcccagccccgcc[C/T]ctgactgcgctgggtaggtggtcg
- ASB in cell types
- LNCaP (prostate carcinoma) breast tumor
- ASB for transcription factors
- MAON_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAON_HUMAN | 1.66 | -0.73 | 1.00 | n/a | n/a | |||
| TBP_HUMAN | 1.11 | 0.17 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid