rs41445046 chr3:122760652 T>C
- Sequence
ttgcaaggtcagcaccactgtaaa[T/C]gcacatggctcacatgtggcagtt
- ASB in cell types
- Tet21N (neuroblastoma)
- ASB for transcription factors
- MYCN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYCN_HUMAN | -0.03 | 2.59 | 1.17 | 1.93 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Thyroid, Whole_Blood