rs41446250 chr19:18279443 G>A
- Sequence
tccttcctgctttgggctggggct[G/A]tgccctttccacctcgaaatctct
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor adult erythroblasts CD34+ stem cells-derived erythroblasts
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.29 | -5.41 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.60 | n/a | 2.00 | -0.73 | Weak Concordant | |||
| KDM6A_HUMAN | 2.44 | n/a | 2.50 | n/a | n/a |
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Motif analysis
