rs41504746 chr11:60854384 T>G
- Sequence
aaataagataagagccaggagagc[T/G]ggggaggaggaactcccacatggg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REQU_HUMAN IKZF1_HUMAN NCOR1_HUMAN ETV1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | -4.25 | 2.81 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | -4.70 | 2.37 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -2.21 | 2.52 | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | -5.13 | 3.05 | 2.00 | n/a | No Hit | |||
| MGAP_HUMAN | -4.93 | 2.83 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Skin_Sun_Exposed_Lower_leg