rs41519246 chr19:18281832 C>T
- Sequence
tgtgggttgacgtcatgggggcgg[C/T]cgcgcgcccgggccgggtcacccc
- ASB in cell types
- 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
- ASB for transcription factors
- ANDR_HUMAN ATF7_HUMAN GATA3_HUMAN CDN1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.93 | 0.32 | 1.88 | n/a | No Hit | |||
| ATF7_HUMAN | -0.14 | 1.40 | 1.50 | n/a | No Hit | |||
| GATA3_HUMAN | n/a | 2.38 | 2.00 | n/a | No Hit | |||
| CDN1B_HUMAN | 1.23 | 0.43 | 2.25 | n/a | n/a |
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