rs41549617 chr6:32852191 G>A
- Sequence
tccctgcaagtggctgtgcacgtg[G/A]cccatggtgttgttatagatcccg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RAD51_HUMAN USF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | n/a | 3.01 | 1.50 | n/a | n/a | |||
| USF2_HUMAN | n/a | 3.38 | 1.50 | 2.28 | Concordant |
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Motif analysis
