rs416170 chr13:59770946 A>G

Sequence
gtgcctttacagccaaagcaaaag[A/G]taacaggtacaacttgtaaccaaa
ASB in cell types
VCaP (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma) 1.04 -0.16 8.3·10-31.00 1.96
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Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis,  total cholesterol
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg

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