rs416544 chr17:77512057 G>A
- Sequence
agaggacagtatgaaaaacgtaat[G/A]tgtgcctgtattagaaaggtcaga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN FOXP1_HUMAN CREB1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.67 | -1.75 | 2.25 | n/a | No Hit | |||
| FOXP1_HUMAN | 1.43 | -3.70 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.40 | -0.18 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | 2.60 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), urinary albumin-to-creatinine ratio