rs417825 chr5:123216464 C>T
- Sequence
caccaagaaatacaaacatctatc[C/T]ctggagtcagacttcctatttgtt
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line) H929 (plasma cell myeloma)
- ASB for transcription factors
- STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.92 | 1.19 | 1.06 | n/a | n/a |
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