rs418065 chr3:7877098 G>A
- Sequence
tgtgtggagcctgggtatagggag[G/A]aagttattgaatcatgcctttcat
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- SPI1_HUMAN FLI1_HUMAN ETS1_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.55 | -0.51 | 2.00 | -4.53 | Concordant | |||
| FLI1_HUMAN | 1.61 | -0.57 | 2.38 | -4.90 | Concordant | |||
| ETS1_HUMAN | 1.91 | -3.21 | 2.00 | -3.97 | Concordant | |||
| TF65_HUMAN | 1.90 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, advanced age-related macular degeneration, hdl cholesterol