rs41821 chr7:106611453 C>T
- Sequence
atcaattctctatctctgttgcca[C/T]gtcactgcagagtttcacatggtc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN MTA2_HUMAN IKZF2_HUMAN TADBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 3.12 | n/a | 1.00 | n/a | No Hit | |||
| MTA2_HUMAN | 1.43 | -1.43 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.49 | -1.15 | 1.00 | n/a | n/a | |||
| TADBP_HUMAN | 2.63 | -2.42 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.08 | -0.73 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, fasting insulin, homa-ir, partial epilepsy, refractive error, sporadic creutzfeldt-jakob disease, systolic blood pressure (sbp), total cholesterol, years of education