rs420709 chr7:102062241 C>T
- Sequence
ggaagttgctgttacaccacaagt[C/T]acgtggcagtgggcagcgatgtgt
- ASB in cell types
- monocytes from periferal blood GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SRBP2_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | n/a | 4.13 | 2.00 | -2.14 | Discordant | |||
| FOXK2_HUMAN | n/a | 2.64 | 1.50 | n/a | No Hit |
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Motif analysis
