rs421625 chr1:242243609 T>C
- Sequence
aggaattcaattcagtcaacacag[T/C]gccttctagtttagggccctttgg
- ASB in cell types
- T47D (invasive ductal carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | 2.03 | -0.25 | 1.38 | -1.18 | Weak Concordant |
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Motif analysis
