rs424001 chr6:13715765 C>T

Sequence
atatgtttgttagaagtgagtcat[C/T]agtttcatcccatattcaagggga
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
JUN_HUMAN JUND_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN 2.81 -2.51 6.3·10-41.00 1.00 -1.77 Weak Concordant
JUND_HUMAN 1.59 -1.59 0.011.00 1.00 -1.26 Weak Concordant
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Motif analysis

JUN_HUMAN Weak Concordant
JUN_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta,  Esophagus_Mucosa,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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