ADASTRA v6.1.0
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rs4248
chr18:4026708
A
>
T
Sequence
cattttctatttctgattctttgg[A/T]cacacagggactttctgggctatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN
IKZF2_HUMAN
RELB_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
-2.94
2.75
1.00
1.7·10
-5
1.25
n/a
n/a
IKZF2_HUMAN
-1.61
2.48
1.00
9.8·10
-4
2.00
n/a
n/a
RELB_HUMAN
-1.97
2.47
1.00
0.02
1.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
maternal transmission distortion
,
transmission distortion
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)