rs425557 chr22:17946513 T>C
- Sequence
aaagatccctcaggcgagcctctg[T/C]gagaacacccacctgcagccccgg
- ASB in cell types
- keratinocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 2.01 | -0.86 | 1.00 | n/a | n/a | |||
| SNAI2_HUMAN | 2.31 | -1.82 | 1.50 | n/a | No Hit |
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