rs425663 chr19:18031613 T>C
- Sequence
aaagatgtgtcagatgagaagtta[T/C]gagactacatctggaacacactca
- ASB in cell types
- macrophages form periferal blood MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood VCaP (prostate carcinoma)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| macrophages form periferal blood | 3.36 | n/a | 2.00 | |||
| MDM(monocyte derived macrophages) | 2.46 | -1.50 | 2.00 | |||
| monocyte-derived macrophages from peripheral blood | 1.98 | n/a | 2.50 | |||
| VCaP (prostate carcinoma) | 1.25 | -0.06 | 2.75 |
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