rs42679 chr5:14809959 C>T
- Sequence
ctacacaggaagttagtttctggg[C/T]gccagctgaattcaagccacagac
- ASB in cell types
- GM01310 ( Transformed lymphovlasoid cell line ) HepG2 (hepatoblastoma)
- ASB for transcription factors
- AHR_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHR_HUMAN | 1.48 | -0.60 | 1.00 | n/a | No Hit | |||
| CDK9_HUMAN | 1.42 | -0.92 | 1.00 | n/a | n/a |
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