ADASTRA v6.1.0
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rs42864
chr5:39283674
C
>
G
Sequence
agggggtctggtcaaggctcagct[C/G]ttttattgtttgacatttgtaatt
ASB in cell types
K562 (myelogenous leukemia)
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
KDM1A_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
0.13
2.24
0.78
0.04
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
infant head circumference
,
mitral annular calcium
,
triglycerides
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)