rs428870 chr21:45106023 T>C
- Sequence
caacaatctagtgcagaaattctt[T/C]tgtaagaacaagctaccctgatgt
- ASB in cell types
- 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | -4.07 | 1.88 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), cystatin c in serum, mitral annular calcium, total cholesterol, triglycerides
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid