rs429294 chr19:16316078 C>T
- Sequence
cacacacacacacacacacacaca[C/T]acaaactccagagacaaccaggca
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- KDM1A_HUMAN ATF3_HUMAN NR2C1_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | -4.25 | 1.46 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | -3.07 | 2.19 | 2.00 | n/a | No Hit | |||
| NR2C1_HUMAN | n/a | 0.76 | 2.00 | n/a | No Hit | |||
| MEIS2_HUMAN | n/a | 1.89 | 2.00 | n/a | No Hit | |||
| PBX2_HUMAN | n/a | 2.35 | 2.00 | n/a | No Hit |
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