rs430102 chr12:92356645 C>G

Sequence
tcatgaccacagggtagtgattat[C/G]tcagcaaggcaaatggctcattaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -2.52 2.33 1.001.3·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma,  biploar disorder (bipolar schizoaffective disorder),  rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Pituitary,  Small_Intestine_Terminal_Ileum

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