rs431551 chr16:84504866 G>T

Sequence
gctgcaggcccgggaatccggccc[G/T]gctgcgtgcgtaccaaggaggcgc
ASB in cell types
pancreas CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
PKNX1_HUMAN STAT1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -0.43 0.43 1.003.4·10-3 1.00 n/a No Hit
STAT1_HUMAN 0.25 2.49 0.650.03 1.67 n/a No Hit
CTCF_HUMAN 0.56 1.15 0.790.04 1.13 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  birth weight

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